STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017263Holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase). (745 aa)    
Predicted Functional Partners:
ENSGMOP00000015712
Pyruvate carboxylase b.
  
 
 0.979
ENSGMOP00000016619
Biotinidase.
    
 0.902
ENSGMOP00000005240
Nitrilase family, member 2.
    
 0.891
ENSGMOP00000001919
acetyl-CoA carboxylase alpha.
  
 0.877
ENSGMOP00000012886
acetyl-CoA carboxylase beta.
  
 0.877
ENSGMOP00000016005
Adenylosuccinate lyase.
  
 
 0.854
ENSGMOP00000013839
propionyl-CoA carboxylase subunit beta.
  
 
 0.846
ENSGMOP00000001555
Cytochrome c oxidase assembly factor COX19.
  
 
 0.843
ENSGMOP00000001918
Phosphopantothenoylcysteine synthetase.
  
 
 0.843
ENSGMOP00000008931
Phosphopantothenoylcysteine decarboxylase.
  
 
 0.843
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.