STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017277annotation not available (600 aa)    
Predicted Functional Partners:
ENSGMOP00000006465
Goosecoid.
    
   0.844
ENSGMOP00000004420
RAB11a, member RAS oncogene family.
    
 0.838
ENSGMOP00000006855
RAB11a, member RAS oncogene family, like.
    
 0.838
ENSGMOP00000007897
RAB11B, member RAS oncogene family, a.
    
 0.838
RAB11A
RAB11A, member RAS oncogene family.
    
 0.838
LOC115549210
Ras-related protein Rab-11B.
    
 0.838
LOC115555445
Ras-related protein Rab-11B-like.
    
 0.838
ENSGMOP00000016057
RAB3A interacting protein (rabin3).
    
 0.833
ENSGMOP00000019463
RAB3A interacting protein (rabin3)-like 1.
    
 0.833
ENSGMOP00000003775
annotation not available
    
 0.821
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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