STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017352NSFL1 (p97) cofactor (p47). (372 aa)    
Predicted Functional Partners:
ENSGMOP00000005233
Valosin containing protein.
   
 0.993
ENSGMOP00000016503
UBX domain protein 6.
    
 0.993
ENSGMOP00000011181
UBX domain protein 7.
    
 
 0.992
ENSGMOP00000000953
annotation not available
    
 0.984
ENSGMOP00000011273
UBX domain protein 2A.
  
 
 
0.984
ENSGMOP00000011826
annotation not available
   
 0.980
ENSGMOP00000016120
Spermatogenesis associated 5-like 1.
   
 0.980
ENSGMOP00000001019
Fas (TNFRSF6) associated factor 1.
    
 0.979
ENSGMOP00000005544
Phospholipase A2-activating protein.
    
 
 0.975
ENSGMOP00000019841
YOD1 deubiquitinase.
   
 
 0.974
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.