STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rab34RAB34, member RAS oncogene family. (266 aa)    
Predicted Functional Partners:
RIC1
RIC1 homolog, RAB6A GEF complex partner 1.
    
 0.871
ENSGMOP00000002675
GDP dissociation inhibitor 2.
   
 0.830
LOC115557592
Rab GDP dissociation inhibitor alpha.
   
 0.830
ENSGMOP00000008751
Zgc:112334.
   
 0.830
ENSGMOP00000011496
VPS52 subunit of GARP complex.
    
 0.824
ENSGMOP00000002510
Component of oligomeric golgi complex 6.
   
 0.800
ENSGMOP00000001487
VPS53 subunit of GARP complex.
    
 0.799
cog8
Component of oligomeric golgi complex 8.
    
 0.786
arl1
ADP ribosylation factor like GTPase 1.
   
 0.777
ENSGMOP00000009881
annotation not available
   
 0.777
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.