STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017440annotation not available (272 aa)    
Predicted Functional Partners:
ENSGMOP00000001489
MRT4 homolog, ribosome maturation factor.
   
   0.854
ENSGMOP00000006145
NIP7 nucleolar pre-rRNA processing protein.
   
    0.801
ENSGMOP00000000280
NHP2 ribonucleoprotein homolog (yeast).
   
    0.749
ENSGMOP00000005268
Glutamate-rich WD repeat containing 1.
   
    0.688
ENSGMOP00000003379
NSA2 ribosome biogenesis homolog (S. cerevisiae).
   
   0.664
ENSGMOP00000005253
annotation not available
   
    0.576
ENSGMOP00000009698
Ly1 antibody reactive homolog (mouse).
   
  
 0.505
ENSGMOP00000013344
Ufm1-specific peptidase 2.
      
 0.476
ENSGMOP00000014045
RNA binding motif protein 19.
   
   0.468
ENSGMOP00000010918
TM2 domain containing 1.
      
 0.463
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.