STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017511annotation not available (228 aa)    
Predicted Functional Partners:
ENSGMOP00000004808
annotation not available
   
 0.880
CHUK
Component of inhibitor of nuclear factor kappa B kinase complex.
    
 0.834
ENSGMOP00000006411
Component of inhibitor of nuclear factor kappa B kinase complex.
   
 0.833
ENSGMOP00000012404
Inhibitor of nuclear factor kappa B kinase subunit beta.
   
 0.833
ENSGMOP00000015684
V-rel avian reticuloendotheliosis viral oncogene homolog B.
   
 0.819
ENSGMOP00000018026
V-rel avian reticuloendotheliosis viral oncogene homolog A.
   
 0.819
ENSGMOP00000020347
annotation not available
   
 0.819
ENSGMOP00000002859
Nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100).
    
 0.814
NFKB1
Nuclear factor kappa B subunit 1.
    
 0.814
ENSGMOP00000019803
Transforming growth factor, beta 1a.
   
 0.786
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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