STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017557Orthodenticle homeobox 2b. (292 aa)    
Predicted Functional Partners:
ENSGMOP00000008074
Zinc finger protein 366.
    
 
 0.535
ENSGMOP00000017693
RAR-related orphan receptor B.
    
 
 0.521
ENSGMOP00000019193
annotation not available
   
 
 0.506
ENSGMOP00000020308
Forkhead box A2.
   
 
 0.506
ENSGMOP00000016126
Fibroblast growth factor 8a.
    
 
 0.499
ENSGMOP00000012508
annotation not available
   
  
 0.491
ENSGMOP00000005053
POU domain, class 5, transcription factor 3.
   
 
 0.478
ENSGMOP00000005342
Sonic hedgehog signaling molecule a.
      
 0.456
ENSGMOP00000021077
Forkhead box G1b.
   
  
 0.445
LOC115530657
Homeobox protein SIX3-like.
   
 
 0.438
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.