STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017634Nuclear VCP like. (755 aa)    
Predicted Functional Partners:
ENSGMOP00000015781
Mtr4 exosome RNA helicase.
   
 0.979
ENSGMOP00000011181
UBX domain protein 7.
   
 0.973
ENSGMOP00000013052
UBX domain protein 1.
   
 0.940
ENSGMOP00000007561
RNA binding motif protein 28.
   
  
 0.939
ENSGMOP00000002662
Ribosome production factor 2 homolog.
   
 
 0.928
ENSGMOP00000005438
Nucleolar protein with MIF4G domain 1.
   
    0.923
ENSGMOP00000007983
NOC3-like DNA replication regulator.
   
  
 0.921
ENSGMOP00000016556
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
  
 
 0.921
ENSGMOP00000001118
NPL4 homolog, ubiquitin recognition factor.
    
 0.919
ENSGMOP00000002920
annotation not available
    
 0.919
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.