STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017669tRNA methyltransferase O. (328 aa)    
Predicted Functional Partners:
ENSGMOP00000005752
Thymidylate synthetase.
    
  0.848
tpi1
Triosephosphate isomerase 1.
    
  0.843
ENSGMOP00000010554
Deoxythymidylate kinase (thymidylate kinase).
    
  0.841
ENSGMOP00000011026
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
    
  0.841
ENSGMOP00000013856
annotation not available
  
 
  0.699
ENSGMOP00000002039
annotation not available
  
 
  0.690
ENSGMOP00000005165
dCMP deaminase.
  
 
  0.690
ENSGMOP00000018499
annotation not available
  
 
  0.690
ENSGMOP00000017732
annotation not available
  
 
  0.645
ENSGMOP00000006203
N-acetylneuraminic acid phosphatase.
  
 
  0.613
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.