STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017690annotation not available (270 aa)    
Predicted Functional Partners:
arl1
ADP ribosylation factor like GTPase 1.
    
  0.730
ENSGMOP00000009881
annotation not available
    
  0.730
ENSGMOP00000009097
annotation not available
   
  0.711
ENSGMOP00000005929
PAX interacting (with transcription-activation domain) protein 1.
   
 0.702
ENSGMOP00000002583
VRK serine/threonine kinase 2.
    
 0.694
ENSGMOP00000012761
VRK serine/threonine kinase 1.
    
 0.694
ENSGMOP00000004009
annotation not available
    
 0.683
ENSGMOP00000004980
Protein phosphatase 2, regulatory subunit B, alpha a.
    
 0.674
LOC115552113
Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform.
    
 0.674
ENSGMOP00000019785
Protein phosphatase 2, regulatory subunit B, alpha b.
    
 0.674
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.