STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017731annotation not available (265 aa)    
Predicted Functional Partners:
ENSGMOP00000018378
GDP-mannose 4,6-dehydratase.
   
 
  0.773
ENSGMOP00000012162
GATA binding protein 6.
    
 0.747
ENSGMOP00000004039
GATA binding protein 5.
    
 0.705
ENSGMOP00000011580
GATA binding protein 4.
    
 0.705
ENSGMOP00000019351
GATA binding protein 1a.
    
 0.676
ENSGMOP00000007486
annotation not available
    
 0.633
VANGL2
VANGL planar cell polarity protein 2.
    
 0.633
ENSGMOP00000020604
annotation not available
    
 0.633
ENSGMOP00000002020
Dishevelled segment polarity protein 3b.
    
 0.599
ENSGMOP00000008416
Dishevelled segment polarity protein 3a.
    
 0.599
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.