STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017750annotation not available (626 aa)    
Predicted Functional Partners:
ENSGMOP00000001001
annotation not available
  
 
0.954
ENSGMOP00000006106
F11 receptor, tandem duplicate 1.
   
 0.952
ENSGMOP00000013268
Occludin a.
   
 0.921
ENSGMOP00000004985
Tight junction protein 1b.
  
 
0.919
ENSGMOP00000002772
Afadin, adherens junction formation factor a.
   
 0.908
ENSGMOP00000013728
annotation not available
   
 0.908
ENSGMOP00000021791
Connexin 43.
   
 0.865
ENSGMOP00000000394
Rap guanine nucleotide exchange factor (GEF) 2.
    
 0.864
ENSGMOP00000019456
Claudin 1.
   
 0.863
ENSGMOP00000010786
Tight junction protein 2a (zona occludens 2).
  
  
 
0.842
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.