STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017793annotation not available (1712 aa)    
Predicted Functional Partners:
ENSGMOP00000013604
annotation not available
  
0.699
ENSGMOP00000003500
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
   
 0.687
ENSGMOP00000018360
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2.
   
 0.687
LOC115561463
Serpin H1-like.
    
 0.677
LOC115547827
Serpin H1-like.
    
 0.677
ENSGMOP00000004481
Collagen, type VI, alpha 2.
  
0.649
ENSGMOP00000014047
Prolyl 4-hydroxylase, beta polypeptide.
   
  0.638
ENSGMOP00000017010
Protein disulfide isomerase family A, member 2.
   
  0.638
ENSGMOP00000017664
Prolyl 4-hydroxylase, alpha polypeptide III.
    
 0.638
ENSGMOP00000020956
Peptidylprolyl isomerase B (cyclophilin B).
    
 0.636
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.