STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB19RAB19, member RAS oncogene family. (220 aa)    
Predicted Functional Partners:
trappc1
Trafficking protein particle complex 1.
    
 0.859
trappc4
Trafficking protein particle complex 4.
    
 0.856
ENSGMOP00000012301
Trafficking protein particle complex 2.
    
 0.855
LOC115561333
Trafficking protein particle complex subunit 6b-like.
    
 0.855
ENSGMOP00000015196
Trafficking protein particle complex 5.
    
 0.852
ENSGMOP00000003371
Trafficking protein particle complex 8.
    
 0.845
ENSGMOP00000010780
annotation not available
    
 0.826
trappc3
Trafficking protein particle complex 3.
    
 0.826
ENSGMOP00000017547
USO1 vesicle transport factor.
   
 0.809
ENSGMOP00000001629
Rab geranylgeranyltransferase subunit beta.
    
 0.799
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.