STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017853Solute carrier family 12 member 5b. (620 aa)    
Predicted Functional Partners:
ENSGMOP00000017875
annotation not available
 
     0.950
ENSGMOP00000001662
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
   
  0.655
ENSGMOP00000006412
annotation not available
   
 0.570
ENSGMOP00000007924
2-epi-5-epi-valiolone synthase.
   
 0.570
ENSGMOP00000002677
Macrophage stimulating 1 receptor b.
    
  0.563
ENSGMOP00000009026
MET proto-oncogene, receptor tyrosine kinase.
    
  0.563
ENSGMOP00000017608
Macrophage stimulating 1 receptor a.
    
  0.563
ENSGMOP00000002144
Solute carrier family 3 member 1.
  
 0.545
ENSGMOP00000002496
Zgc:91860.
  
 0.545
ENSGMOP00000013319
Zgc:92137.
  
 0.545
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.