STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017879EBF transcription factor 3a. (539 aa)    
Predicted Functional Partners:
ENSGMOP00000012331
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.666
ENSGMOP00000005544
Phospholipase A2-activating protein.
    
   0.650
ENSGMOP00000019841
YOD1 deubiquitinase.
    
   0.650
ENSGMOP00000005233
Valosin containing protein.
    
 0.568
ENSGMOP00000011826
annotation not available
   
 0.564
ENSGMOP00000016120
Spermatogenesis associated 5-like 1.
   
 0.564
ENSGMOP00000017734
Cytochrome b5 reductase 4.
    
 0.475
ENSGMOP00000000537
Eukaryotic translation elongation factor 1 gamma.
    
   0.463
ENSGMOP00000000389
stearoyl-CoA desaturase (delta-9-desaturase).
    
 
 0.456
ENSGMOP00000013449
stearoyl-CoA desaturase b.
    
 
 0.456
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.