STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000017949DNA-damage inducible protein 2. (416 aa)    
Predicted Functional Partners:
ENSGMOP00000012733
Ribosomal protein S27a.
   
 
 0.840
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 
 0.783
psmd2
Proteasome 26S subunit, non-ATPase 2.
    
 
 0.758
ENSGMOP00000003758
Ubiquilin 4.
   
 
 0.743
RAD23B
RAD23 homolog B, nucleotide excision repair protein.
   
 
 0.736
ENSGMOP00000009298
RAD23 homolog A, nucleotide excision repair protein b.
   
 
 0.736
ENSGMOP00000019372
RAD23 homolog A, nucleotide excision repair protein a.
   
 
 0.736
ENSGMOP00000001034
Ubiquitin-like 7b (bone marrow stromal cell-derived).
   
 
 0.690
ENSGMOP00000003363
annotation not available
   
 
 0.686
ENSGMOP00000007083
Zinc finger, AN1-type domain 4.
   
 
 0.676
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.