STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018005Agmatine ureohydrolase (agmatinase). (113 aa)    
Predicted Functional Partners:
ENSGMOP00000017378
Ornithine aminotransferase.
  
 0.965
ENSGMOP00000009520
Spermidine synthase.
  
 
 0.946
sms
Spermine synthase.
  
 
 0.940
ENSGMOP00000003966
Ornithine carbamoyltransferase.
   
 0.940
ENSGMOP00000010970
Histidine ammonia-lyase.
  
 
 0.932
ENSGMOP00000012132
Argininosuccinate lyase.
    
 0.921
ENSGMOP00000004527
Ornithine decarboxylase 1.
  
 
 0.920
ENSGMOP00000017618
Aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase).
  
 0.918
ENSGMOP00000007081
annotation not available
  
 
 0.902
ENSGMOP00000013323
annotation not available
  
 
 0.902
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.