STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018044annotation not available (113 aa)    
Predicted Functional Partners:
ENSGMOP00000017581
CCR4-NOT transcription complex, subunit 2.
    
 
 0.689
ENSGMOP00000001019
Fas (TNFRSF6) associated factor 1.
    
 
 0.630
faf2
Fas associated factor family member 2.
    
 
 0.630
ENSGMOP00000005233
Valosin containing protein.
    
 
 0.581
ENSGMOP00000011826
annotation not available
    
 
 0.581
ENSGMOP00000016120
Spermatogenesis associated 5-like 1.
    
 
 0.581
ENSGMOP00000008180
Von Hippel-Lindau tumor suppressor.
   
 
  0.535
ENSGMOP00000006069
Ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast).
    
 
 0.530
ENSGMOP00000007028
C1q and TNF related 12.
    
 
 0.485
ube2j2
Ubiquitin conjugating enzyme E2 J2.
    
 
 0.485
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.