STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018080annotation not available (601 aa)    
Predicted Functional Partners:
ENSGMOP00000017190
AT rich interactive domain 2 (ARID, RFX-like).
   
 0.985
ENSGMOP00000013325
PHD finger protein 10.
    
 0.983
actl6a
Actin like 6A.
   
 0.978
ENSGMOP00000008515
Polybromo 1.
   
 0.962
ENSGMOP00000018120
annotation not available
   
 0.962
ENSGMOP00000002183
annotation not available
   
 0.959
SMARCE1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1.
   
 0.959
ENSGMOP00000009215
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b.
   
 0.952
SMARCB1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
   
 0.952
ENSGMOP00000000855
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 2.
   
 0.920
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.