STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018087Calcium binding protein 5a. (160 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.819
ENSGMOP00000017627
annotation not available
    
 0.819
ENSGMOP00000002700
Myosin IIIB.
   
 0.773
ENSGMOP00000016808
Myosin IIIA.
   
 0.773
ENSGMOP00000008112
Guanylate kinase 1b.
   
  0.694
ENSGMOP00000010824
annotation not available
   
 0.641
ENSGMOP00000020711
Xeroderma pigmentosum, complementation group C.
    
 0.627
ENSGMOP00000011423
Guanylate kinase 1a.
   
  0.625
ENSGMOP00000001662
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
    
  0.624
ENSGMOP00000010713
NME/NM23 family member 8.
   
 
 0.609
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.