STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018134Zgc:162872. (549 aa)    
Predicted Functional Partners:
ENSGMOP00000016127
ADP-ribosylation factor GTPase activating protein 1.
   
0.737
ENSGMOP00000016238
Si:dkey-16l2.16.
    
 
 0.692
rab35
RAB35, member RAS oncogene family.
    
 
 0.692
ENSGMOP00000009601
Adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2.
   
 
0.670
ENSGMOP00000014636
HESX homeobox 1.
   
 
0.670
ENSGMOP00000010027
ADP-ribosylation factor GTPase activating protein 3.
    
0.636
ENSGMOP00000015934
ADP-ribosylation factor GTPase activating protein 2.
    
 0.636
LOC115544443
ADP-ribosylation factor 6.
    
 0.617
ENSGMOP00000022051
ADP-ribosylation factor 6a.
    
 0.617
ENSGMOP00000001706
annotation not available
    
0.587
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.