STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018145R-spondin 1. (183 aa)    
Predicted Functional Partners:
ENSGMOP00000004924
annotation not available
  
 0.942
ENSGMOP00000020126
Danio rerio leucine-rich repeat containing G protein-coupled receptor 4 (lgr4), mRNA.
  
 0.942
ENSGMOP00000014766
annotation not available
   
 0.901
ENSGMOP00000000510
Zinc and ring finger 3.
   
 0.895
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
    
 0.885
ENSGMOP00000000977
Fras1 related extracellular matrix 1a.
    
 0.851
ENSGMOP00000018834
Fras1 related extracellular matrix 1b.
    
 0.851
ENSGMOP00000006940
R-spondin 2.
  
  
 
0.847
ENSGMOP00000009483
Relaxin family peptide receptor 1.
  
 0.777
ENSGMOP00000014154
Relaxin family peptide receptor 2a.
  
 0.777
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.