STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018181KRIT1 ankyrin repeat containing. (631 aa)    
Predicted Functional Partners:
LOC115557768
Ras-related protein Rap-1A-like.
    
 0.974
LOC115550068
Ras-related protein Rap-1b.
    
 0.974
ENSGMOP00000010751
CCM2 scaffold protein.
    
 
 0.973
ENSGMOP00000012012
Integrin beta 1 binding protein 1.
    
 
 0.972
ENSGMOP00000014037
Sorting nexin 17.
    
 
 0.941
ENSGMOP00000015098
CCM2 like scaffold protein.
    
 
 0.899
ENSGMOP00000000286
annotation not available
    
 
 0.893
ENSGMOP00000000297
annotation not available
    
 
 0.893
CTNNB1
Catenin beta 1.
     
 0.881
LOC115552388
Ras-related protein Rap-2c.
    
 0.828
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.