STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018272Neurotrophin receptor associated death domain. (390 aa)    
Predicted Functional Partners:
ENSGMOP00000020066
Brain-derived neurotrophic factor.
     
 0.880
ENSGMOP00000001128
annotation not available
     
 0.878
ENSGMOP00000009504
ephrin-A2a.
     
 0.870
ENSGMOP00000011707
ephrin-A1a.
     
 0.864
ENSGMOP00000020588
ephrin-A1b.
     
 0.864
fadd
Fas associated via death domain.
    
 0.853
ENSGMOP00000005497
annotation not available
  
 
 
0.850
ENSGMOP00000008179
ephrin-A5b.
     
 0.848
ENSGMOP00000010753
ephrin-A5a.
     
 0.848
ENSGMOP00000016794
Nerve growth factor receptor a (TNFR superfamily, member 16).
  
 
 
0.847
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.