STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018275Protein phosphatase 1, regulatory subunit 42. (251 aa)    
Predicted Functional Partners:
cops4
COP9 signalosome subunit 4.
   
 0.987
cops2
COP9 signalosome subunit 2.
   
 0.986
COPS6
COP9 signalosome subunit 6.
   
 0.985
cops3
COP9 signalosome subunit 3.
   
 0.984
ENSGMOP00000000678
COP9 signalosome subunit 8.
   
 0.983
ENSGMOP00000009035
G protein pathway suppressor 1.
   
 0.982
ENSGMOP00000016429
COP9 constitutive photomorphogenic homolog subunit 7A.
    
 0.980
ENSGMOP00000004325
NEDD8 ubiquitin like modifier, like.
   
 0.974
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.972
ENSGMOP00000019021
Cullin 2.
   
 0.961
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.