STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018360Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2. (702 aa)    
Predicted Functional Partners:
ENSGMOP00000006644
Cerebral endothelial cell adhesion molecule.
   
0.897
ENSGMOP00000010031
Collagen beta(1-O)galactosyltransferase 1.
   
0.897
ENSGMOP00000011330
annotation not available
   
0.897
ENSGMOP00000009644
Suppressor of variegation 3-9 homolog 1b.
    
  0.864
ENSGMOP00000014289
annotation not available
   
 0.862
ENSGMOP00000014242
Nuclear receptor binding SET domain protein 1b.
    
 0.859
ENSGMOP00000004113
Nuclear receptor binding SET domain protein 2.
    
 0.858
ENSGMOP00000014567
Nuclear receptor binding SET domain protein 3.
    
 0.858
ENSGMOP00000009624
SET and MYND domain containing 2b.
   
  0.856
ENSGMOP00000001003
SET and MYND domain containing 4.
   
  0.854
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.