STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018363PC4 and SFRS1 interacting protein 1a. (372 aa)    
Predicted Functional Partners:
ENSGMOP00000007937
Multiple endocrine neoplasia I.
    
 
 0.952
ENSGMOP00000005368
annotation not available
    
 
 0.927
ENSGMOP00000015817
Structural maintenance of chromosomes 3.
   
 
 0.834
ENSGMOP00000000116
Lysine (K)-specific methyltransferase 2Bb.
    
 
 0.827
ENSGMOP00000012588
Lysine (K)-specific methyltransferase 2A.
    
 
 0.827
ENSGMOP00000018567
Lysine (K)-specific methyltransferase 2Ba.
    
 
 0.827
ENSGMOP00000003653
DnaJ heat shock protein family (Hsp40) member B13.
    
 
 0.678
ENSGMOP00000008762
DnaJ heat shock protein family (Hsp40) member B1a.
    
 
 0.678
ENSGMOP00000009499
annotation not available
    
 
 0.678
ENSGMOP00000011430
annotation not available
    
 
 0.678
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.