STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018581Double C2-like domains, beta. (304 aa)    
Predicted Functional Partners:
ENSGMOP00000000670
RAB3A, member RAS oncogene family, a.
   
 
 0.557
ENSGMOP00000002296
RAB3D, member RAS oncogene family, b.
   
 
 0.557
ENSGMOP00000008399
RAB3C, member RAS oncogene family.
   
 
 0.557
RAB3D
RAB3D, member RAS oncogene family.
   
 
 0.557
ENSGMOP00000011950
annotation not available
   
 
 0.497
ENSGMOP00000013293
Synaptosome associated protein 25a.
   
 
 0.493
ENSGMOP00000013399
annotation not available
   
 
 0.493
ENSGMOP00000002881
RAB27A, member RAS oncogene family.
    
 
 0.475
ENSGMOP00000012073
RAB27B, member RAS oncogene family.
    
 
 0.475
ENSGMOP00000019013
annotation not available
    
 
 0.475
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.