STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018612Hyperpolarization activated cyclic nucleotide-gated potassium channel 3. (244 aa)    
Predicted Functional Partners:
ENSGMOP00000002074
Sodium channel, voltage-gated, type I like, alpha b.
    
 0.474
ENSGMOP00000002807
Sodium channel, voltage gated, type VIII, alpha subunit b.
    
 0.474
ENSGMOP00000004647
Sodium channel, voltage gated, type XII, alpha a.
    
 0.474
ENSGMOP00000008848
Sodium channel, voltage gated, type VIII, alpha subunit a.
    
 0.474
ENSGMOP00000015679
annotation not available
    
 0.474
ENSGMOP00000003144
Sodium channel, voltage-gated, type IV, alpha, a.
    
 0.453
ENSGMOP00000010644
annotation not available
    
 0.453
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.