STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MCUBMitochondrial calcium uniporter dominant negative beta subunit. (330 aa)    
Predicted Functional Partners:
ENSGMOP00000018589
Mitochondrial calcium uptake 1.
    
 0.965
smdt1
Single-pass membrane protein with aspartate rich tail 1.
    
 0.964
ENSGMOP00000009272
Mitochondrial calcium uptake 2.
    
 0.947
ENSGMOP00000007365
Mitochondrial calcium uptake family, member 3a.
     
 0.796
PHB2
Prohibitin 2.
     
 0.712
ENSGMOP00000001655
SPG7 matrix AAA peptidase subunit, paraplegin.
     
 0.675
ENSGMOP00000004146
Si:ch1073-174d20.2.
     
 0.657
ENSGMOP00000010093
AFG3-like AAA ATPase 2.
     
 0.657
ENSGMOP00000015198
Prohibitin.
     
 0.655
ENSGMOP00000012559
YME1-like 1b.
     
 0.575
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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