STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018635Lymphoid enhancer-binding factor 1. (362 aa)    
Predicted Functional Partners:
CTNNB1
Catenin beta 1.
    
 0.996
ENSGMOP00000009303
LEO1 homolog, Paf1/RNA polymerase II complex component.
     
 0.980
ENSGMOP00000001846
Nemo-like kinase, type 1.
    
 0.962
ENSGMOP00000018213
annotation not available
    
 0.950
ENSGMOP00000020855
annotation not available
    
 0.945
ENSGMOP00000020989
Junction plakoglobin a.
    
 0.945
ENSGMOP00000000295
annotation not available
    
 0.931
SMAD4
SMAD family member 4.
    
 0.931
ENSGMOP00000014927
SMAD family member 4b.
    
 0.931
CREBBP
CREB binding protein.
    
 0.909
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.