STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018688Solute carrier family 39 member 1. (326 aa)    
Predicted Functional Partners:
ENSGMOP00000004502
annotation not available
    
 0.769
LOC115558354
Casein kinase II subunit alpha'-like.
    
 0.769
ENSGMOP00000009848
Casein kinase 2, alpha 1 polypeptide.
    
 0.769
ENSGMOP00000018620
Casein kinase 2, alpha 4 polypeptide.
    
 0.769
ENSGMOP00000004871
annotation not available
    
 
 0.756
LOC115551034
Sorting and assembly machinery component 50 homolog A.
    
 
 0.756
mtx3
Metaxin 3.
    
 
 0.732
ENSGMOP00000021017
Metaxin 1a.
    
 
 0.732
SLC39A11
Solute carrier family 39 member 11.
   
 0.645
ENSGMOP00000004607
Solute carrier family 39 member 7.
   
 0.605
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.