STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018727Phospholipid phosphatase related 5b. (302 aa)    
Predicted Functional Partners:
ENSGMOP00000014233
Mediator complex subunit 17.
    
 0.875
ENSGMOP00000014275
Mediator complex subunit 10.
    
 0.873
ENSGMOP00000013827
Mediator complex subunit 14.
    
 0.872
ENSGMOP00000014994
Mediator complex subunit 6.
    
 0.872
ENSGMOP00000005617
Mediator complex subunit 4.
    
 0.870
med20
Mediator complex subunit 20.
   
 0.869
ENSGMOP00000012295
Mediator complex subunit 15.
    
 0.869
med7
Mediator complex subunit 7.
   
 0.869
ENSGMOP00000003021
Mediator complex subunit 31.
    
 0.861
ENSGMOP00000006896
Mediator complex subunit 23.
    
 0.858
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.