STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018754Syntaxin 18. (320 aa)    
Predicted Functional Partners:
ENSGMOP00000014118
Zw10 kinetochore protein.
    
 0.998
ENSGMOP00000014343
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
   
 0.998
ENSGMOP00000005856
Ribosomal protein S6 kinase polypeptide 1.
    
 0.993
ENSGMOP00000012944
Sorting nexin 15.
    
 0.993
ENSGMOP00000001229
RAD50 interactor 1.
    
 0.989
ENSGMOP00000012070
NBAS subunit of NRZ tethering complex.
    
 0.988
ENSGMOP00000017667
BCL2 interacting protein 1b.
   
 0.986
ENSGMOP00000000788
annotation not available
   
 0.983
ENSGMOP00000019557
SEC22 homolog B, vesicle trafficking protein b.
   
 0.983
ENSGMOP00000006586
Sec1 family domain containing 1.
    
 
 0.966
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.