STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018802Si:ch211-117c9.1. (265 aa)    
Predicted Functional Partners:
ENSGMOP00000013018
Serine/threonine kinase 11.
  
 
0.713
ENSGMOP00000021848
Testis-specific serine kinase 6.
  
 
0.493
ENSGMOP00000003234
annotation not available
  
 
0.486
ENSGMOP00000013360
annotation not available
  
 
0.464
ENSGMOP00000003723
Protein kinase, AMP-activated, alpha 1 catalytic subunit.
  
 
0.463
ENSGMOP00000008352
Protein kinase, AMP-activated, alpha 2 catalytic subunit.
  
 
0.462
ENSGMOP00000008291
Tumor protein p53.
    
 0.461
ENSGMOP00000010733
Si:ch211-22d5.2.
  
 
0.461
ENSGMOP00000004247
Pim-1 proto-oncogene, serine/threonine kinase.
  
 
0.458
ENSGMOP00000007117
annotation not available
  
 
0.457
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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