STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BFARBifunctional apoptosis regulator. (438 aa)    
Predicted Functional Partners:
ENSGMOP00000012733
Ribosomal protein S27a.
   
  0.791
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.766
ENSGMOP00000013739
annotation not available
    
 0.713
ENSGMOP00000004325
NEDD8 ubiquitin like modifier, like.
    
 0.698
ENSGMOP00000007861
Thyroid hormone receptor interactor 12.
    
 0.684
skp1
S-phase kinase associated protein 1.
    
 0.677
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
 0.651
ENSGMOP00000005929
PAX interacting (with transcription-activation domain) protein 1.
   
 0.642
ENSGMOP00000008600
Nibrin.
    
 0.636
ENSGMOP00000007083
Zinc finger, AN1-type domain 4.
    
 0.634
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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