STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP000000188533'-phosphoadenosine 5'-phosphosulfate synthase 1. (623 aa)    
Predicted Functional Partners:
flad1
Flavin adenine dinucleotide synthetase 1.
  
 0.997
ENSGMOP00000002141
annotation not available
     
 0.954
LOC115559686
Elongation factor 1-alpha, somatic form.
 
   
 0.942
ENSGMOP00000006489
Si:dkey-37o8.1.
 
   
 0.942
LOC115536142
Elongation factor 1-alpha.
 
   
 0.942
LOC115536143
Elongation factor 1-alpha-like.
 
   
 0.942
GSPT1
G1 to S phase transition 1.
 
   
 0.942
ENSGMOP00000010628
annotation not available
 
   
 0.932
ENSGMOP00000005251
Bisphosphate nucleotidase 1.
  
 
 0.910
ENSGMOP00000017410
Inositol monophosphatase domain containing 1.
  
 
 0.910
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.