STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
YTHDF1YTH N6-methyladenosine RNA binding protein 1. (607 aa)    
Predicted Functional Partners:
ENSGMOP00000004874
annotation not available
    
 
 0.739
ENSGMOP00000005238
CCR4-NOT transcription complex, subunit 8.
   
 
 0.677
ENSGMOP00000016462
Ubiquitin-conjugating enzyme E2Z.
   
    0.528
ENSGMOP00000001697
WT1 associated protein.
   
  
 0.520
ENSGMOP00000015954
Vir like m6A methyltransferase associated.
    
 
 0.496
ENSGMOP00000004167
Methyltransferase like 14.
      
 0.485
ENSGMOP00000008228
alkB homolog 5, RNA demethylase.
      
 0.483
ENSGMOP00000015781
Mtr4 exosome RNA helicase.
    
 
 0.478
EEF2
Eukaryotic translation elongation factor 2.
    
 
 0.466
ENSGMOP00000006225
annotation not available
    
 
 0.463
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.