STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018902Immunoglobulin mu DNA binding protein 2. (985 aa)    
Predicted Functional Partners:
ENSGMOP00000006356
Negative elongation factor complex member E.
    
   0.658
ENSGMOP00000016531
Negative elongation factor complex member A.
   
   0.637
ENSGMOP00000014319
Terminal uridylyl transferase 1, U6 snRNA-specific.
   
    0.603
ENSGMOP00000011412
Nth-like DNA glycosylase 1.
 
      0.584
ENSGMOP00000006968
tyrosyl-tRNA synthetase 1.
      
 0.581
ENSGMOP00000007634
Activator of basal transcription 1.
    
 
 0.562
ENSGMOP00000005707
Ganglioside induced differentiation associated protein 1.
      
 0.520
ENSGMOP00000001569
RNA binding protein S1, serine-rich domain.
      
 0.440
ENSGMOP00000007305
Leucine rich repeat and sterile alpha motif containing 1.
   
  
 0.435
ENSGMOP00000015015
G-rich RNA sequence binding factor 1.
    
   0.434
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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