STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018917Polycomb group ring finger 5a. (248 aa)    
Predicted Functional Partners:
ENSGMOP00000009660
Ring finger protein 2.
    
 0.966
RING1
Ring finger protein 1.
    
 0.957
ENSGMOP00000003554
Fibrosin.
    
 0.918
ENSGMOP00000006208
Casein kinase 2, beta polypeptide.
    
 0.903
YAF2
YY1 associated factor 2.
    
 0.869
ENSGMOP00000007878
RING1 and YY1 binding protein b.
    
 0.869
ENSGMOP00000020187
annotation not available
    
 0.869
ENSGMOP00000008160
Fibrosin-like 1.
    
 0.792
ENSGMOP00000013099
Activator of transcription and developmental regulator AUTS2 a.
    
 0.792
ENSGMOP00000012098
Chromobox homolog 8a (Pc class homolog, Drosophila).
    
 0.787
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.