STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000018919annotation not available (344 aa)    
Predicted Functional Partners:
ENSGMOP00000009741
Histone cell cycle regulator a.
    
 0.979
ENSGMOP00000012320
Calcineurin binding protein 1.
   
 0.970
ASF1B
Histone chaperone asf1b-B.
    
 0.944
UPF1
UPF1 RNA helicase and ATPase.
   
  
 0.606
ENSGMOP00000008296
SLAIN motif family, member 2.
   
 0.555
FBXO40
F-box protein 40.
    
 0.540
ENSGMOP00000000166
annotation not available
    
 0.540
ENSGMOP00000001156
Neuroplastin b.
    
 0.540
ENSGMOP00000001452
Coagulation factor C homolog, cochlin (Limulus polyphemus).
    
 0.540
ENSGMOP00000001688
FRAS1 related extracellular matrix 2b.
    
 0.540
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.