STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtres1Mitochondrial transcription rescue factor 1. (225 aa)    
Predicted Functional Partners:
ENSGMOP00000012999
Chromosome 12 open reading frame 65.
    
 
 0.846
ENSGMOP00000005220
Mitochondrial ribosomal protein L11.
    
 
 0.831
mrpl58
Mitochondrial ribosomal protein L58.
    
 
 0.829
ENSGMOP00000009150
Mitochondrial ribosomal protein L16.
   
   0.820
ENSGMOP00000021643
annotation not available
   
   0.819
ENSGMOP00000018210
Mitochondrial ribosomal protein L9.
   
   0.818
ENSGMOP00000005110
Mitochondrial ribosomal protein L13.
   
   0.816
ENSGMOP00000002085
Mitochondrial ribosomal protein L33.
   
   0.815
ENSGMOP00000014634
Mitochondrial ribosomal protein L22.
    
   0.810
ENSGMOP00000018285
Mitochondrial ribosomal protein L3.
   
   0.799
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.