STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019007annotation not available (473 aa)    
Predicted Functional Partners:
ENSGMOP00000015866
Interferon induced with helicase C domain 1.
   
 0.595
ENSGMOP00000012733
Ribosomal protein S27a.
    
  0.582
ENSGMOP00000016217
DEXH (Asp-Glu-X-His) box polypeptide 58.
   
 0.569
ENSGMOP00000009338
annotation not available
    
 0.568
ENSGMOP00000013712
Interferon regulatory factor 3.
   
 0.525
ENSGMOP00000008109
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.500
ENSGMOP00000007083
Zinc finger, AN1-type domain 4.
    
 0.481
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
 0.477
ENSGMOP00000001930
annotation not available
    
  0.472
ENSGMOP00000013918
Growth arrest-specific 7a.
    
  0.472
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.