STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019022Phosphatidylinositol 3-kinase, catalytic subunit type 3. (881 aa)    
Predicted Functional Partners:
ENSGMOP00000003697
Phosphoinositide-3-kinase, regulatory subunit 4.
   
 0.999
becn1
Beclin 1.
    
 0.999
ENSGMOP00000005149
annotation not available
    
 0.998
ENSGMOP00000013029
UV radiation resistance associated gene.
    
 0.998
ENSGMOP00000012524
annotation not available
    
 0.996
ENSGMOP00000002819
Unc-51 like autophagy activating kinase 2.
    
 0.977
ENSGMOP00000006886
Unc-51 like autophagy activating kinase 1.
    
 0.977
ENSGMOP00000007292
Unc-51 like autophagy activating kinase 1a.
    
 0.977
ENSGMOP00000007350
RAB5B, member RAS oncogene family.
    
 0.958
ENSGMOP00000006160
Rubicon autophagy regulator.
    
 
 0.957
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.