STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019077GATA binding protein 2a. (449 aa)    
Predicted Functional Partners:
ENSGMOP00000002083
T-box transcription factor 21.
   
 0.873
ENSGMOP00000006228
T-cell acute lymphocytic leukemia 1.
   
 0.807
lmo2
LIM domain only 2.
    
 0.792
ENSGMOP00000015037
annotation not available
    
 0.773
ENSGMOP00000002508
annotation not available
    
 0.763
nfyc
Nuclear transcription factor Y subunit gamma.
   
 
 0.759
ENSGMOP00000019193
annotation not available
    
 0.753
ENSGMOP00000020308
Forkhead box A2.
    
 0.753
ENSGMOP00000020161
Spi-1 proto-oncogene b.
    
 0.746
ENSGMOP00000020870
Nuclear transcription factor Y, beta a.
    
 
 0.746
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.