STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019091Rho guanine nucleotide exchange factor (GEF) 38. (504 aa)    
Predicted Functional Partners:
ENSGMOP00000019109
annotation not available
 
     0.923
ENSGMOP00000001944
Bridging integrator 1a.
    
 
 0.714
ENSGMOP00000005153
Bridging integrator 2b.
    
 
 0.714
ENSGMOP00000010945
Amphiphysin.
    
 
 0.714
ENSGMOP00000014596
Bridging integrator 1b.
    
 
 0.714
ENSGMOP00000005861
NADPH oxidase organizer 1b.
    
 0.686
ENSGMOP00000009403
SH3 and PX domains 2Aa.
    
 0.686
ENSGMOP00000010358
annotation not available
    
 0.686
ENSGMOP00000012389
NADPH oxidase organizer 1a.
    
 0.686
ENSGMOP00000012648
Neutrophil cytosolic factor 1.
    
 0.686
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.