STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019092Crystallin, beta B3. (241 aa)    
Predicted Functional Partners:
ENSGMOP00000011404
TSC complex subunit 2.
    
 0.947
ENSGMOP00000010431
Mechanistic target of rapamycin kinase.
    
 0.915
ENSGMOP00000014099
Regulatory associated protein of MTOR, complex 1.
    
 0.894
ENSGMOP00000014534
Intersectin 2b.
    
 0.879
ENSGMOP00000019906
Intersectin 2a.
    
 0.879
ENSGMOP00000005592
annotation not available
   
 0.866
ENSGMOP00000019710
TSC complex subunit 1b.
   
 0.866
ENSGMOP00000012990
Dedicator of cytokinesis 4b.
    
 0.857
ENSGMOP00000018121
Intersectin 1 (SH3 domain protein).
    
 0.839
mlst8
MTOR associated protein, LST8 homolog.
    
 0.824
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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