STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gcn1GCN1 activator of EIF2AK4. (2668 aa)    
Predicted Functional Partners:
ENSGMOP00000002609
ATP-binding cassette, sub-family F (GCN20), member 3.
   
 
 0.980
RPL19
Ribosomal protein L19.
 
 
   0.962
ENSGMOP00000011442
Developmentally regulated GTP binding protein 2.
   
 
 0.959
rps13
Ribosomal protein S13.
   
 
 0.946
ENSGMOP00000012718
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
 
 0.945
rps2
Ribosomal protein S2.
   
 
 0.940
rps9
Ribosomal protein S9.
   
 
 0.938
rps3
Ribosomal protein S3.
   
 
 0.935
ENSGMOP00000000826
Receptor for activated C kinase 1.
   
 
 0.931
rpl15
Ribosomal protein L15.
   
 
 0.928
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.