STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSGMOP00000019137Transcription factor AP-2 beta. (445 aa)    
Predicted Functional Partners:
yeats4
YEATS domain containing 4.
    
 0.687
KCTD15
Potassium channel tetramerization domain containing 15.
   
 0.682
KCTD1
Potassium channel tetramerization domain containing 1.
   
 0.682
ENSGMOP00000005739
Potassium channel tetramerization domain containing 15a.
   
 0.682
ENSGMOP00000017896
annotation not available
   
 0.682
ENSGMOP00000017903
annotation not available
   
 0.682
ENSGMOP00000006853
DEK proto-oncogene.
    
 0.674
ENSGMOP00000010305
annotation not available
   
  0.674
ENSGMOP00000002844
Nucleophosmin 1b.
   
  0.673
ENSGMOP00000004885
annotation not available
    
 0.673
Your Current Organism:
Gadus morhua
NCBI taxonomy Id: 8049
Other names: Atlantic cod, G. morhua
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.